Job Description P10423 Confidence 99.36% Date Thu Jan 5 11:32:15 GMT 2012 Rank 53 Aligned Residues 258 % Identity 19% Template c1vheA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:aminopeptidase/glucanase homolog; PDBTitle: crystal structure of a aminopeptidase/glucanase homolog Resolution 1.90 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		T	Q	A	R	H	I	A	T	F	F	P	G	R	M	T	G	T	P	A	E	M	L	S	A	D	Y	I	R	Q	Q	F	Q	Q	M	G	Y	R	S	D	I	R	T	F	N	S	R	Y	I	Y	T	A	R	D	N	R	K	S	W	H	N	V	T	G	S	T	V	I	A	A	H	E	G	K	A	.	P	Q	Q	I	I
Query Conservation																																																																												.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	T	L	T	X	L	K	D	L	T	D	A	K	G	I	P	G	N	E	R	E	V	R	Q	V	X	K	S	Y	I	E	P	F	A	D	E	V	T	T	D	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	I	A	K	K	T	G	A	E	N	G	P	K	I	X
Template Known Secondary structure														S				T	T														G	G	G		S						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	A	H	L	D	T	Y	A	P	L	S	D	A	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	H	L	D	E	V	G	F	X	V	T	Q	I	T	D	K	G	F	I	R	F	Q	T	V	G	G	W	W	A	Q	V	X	L	A	Q	R	V	T	I	V	T	K	K	G	E	I	T	G	V	I	G	S	K	P	P	H	I	L	S	P	E	A	R	K	K	S	V	E	I	K	D	X	F	I	D	I	G	A
Template Known Secondary structure																		T	T	S								S				G	G	G	T	T	T								T	T												G	G	G	S		T	T	T	T	T	S				G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
																											131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	G	G	L	T	L	Q	G	M	D	D	N	A	A	G	L	G	V	M	L	E	L	A	E	R	L	K	N	T	P	T	E	Y	G	I	R	F	V	A	T	S	G	E	E	E	G	K	L	G	A	E	N	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	R	E	E	A	L	E	W	G	V	L	P	G	D	X	I	V	P	H	F	E	F	T	V	X	N	N	E	K	F	L	L	A	K	A	W	D	N	R	I	G	C	A	I	A	I	D	V	L	R	N	L	Q	N	T	D	H	P	N	I	V	Y	G	V	G	T	V	Q	E	E	V	G	L	R	G	A	K	T	A
Template Known Secondary structure		S	S							T	T			T	T													S	S	T	T					T	T																			T	S			S	S								S			T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	M	S	D	T	E	K	K	N	T	L	L	V	I	N	L	D	N	L	I	V	G	D	K	L	Y	F	N	S	G	V	K	T	P	E	A	V	R	K	L	T	R	D	R	A	L	A	I	A	R	S	H	G	I	A	A	T	T	N	P	G	L	N	K	N	Y	P	K	G	T	G	C	C	N	D	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	T	I	Q	P	D	I	A	F	G	V	D	V	G	I	A	G	D	T	P	G	I	S	E	K	E	A	Q	S	K	X	G	K	G	P	Q	I	I	V	Y	D	A	S	X	V	S	H	K	G	L	R	D	A	V	V	A	T	A	E	E	A	G	I	P	Y	Q	F	D	A	I	A	G	G	G	T	D	S	G	A
Template Known Secondary structure								S													S	T	T			T	T	T					T	T	S									T	T																			T									T	T				T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		266	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		F	D	K	A	.	.	G	I	A	V	L	S	V	E	A	T	N	W	N	L	G	N	K	D	G	Y	Q	Q	R	A	K	T	P	A	F	P	A	G	N	S	W	H	D	V	R	L	D	N	H	Q	H	I	D	K	A	L	P	G	R	I	E	R	R	C	R	D	V	M	R	I	M	L	P	L	V	K	E	L	A	K
Query Conservation						.	.
Alig confidence						.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.							.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.							.	.	.	.	.	.	.
Template Sequence		I	H	L	T	A	N	G	V	P	A	L	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	T	R	Y	I	H	T	H	A	.	.	.	.	A	X	L	H	R	D	.	.	.	.	.	.	.	D	Y	E	N	A	V	K	L	I	T	E	V	I	K	K	L	D	R
Template Known Secondary structure			T	T	S	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B	S	T	T	S	S		.	.	.	.							.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.							.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.																						.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		344
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		353

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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