Job Description P10423 Confidence 99.50% Date Thu Jan 5 11:32:15 GMT 2012 Rank 44 Aligned Residues 157 % Identity 18% Template c1vgyB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of succinyl diaminopimelate desuccinylase Resolution 1.90 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	A	R	H	I	A	T	F	F	P	G	R	M	T	G	T	P	A	E	M	L	S	A	D	Y	I	R	Q	Q	F	Q	Q	M	G	Y	R	S	D	I	R	T	F	N	S	R	Y	I	Y	T	A	R	D	N	R	K	S	W	H	N	V	T	G	S	T	V	I	A	A	H	E	G	K	A	P	Q	Q	I	I	I
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		T	Q	S	L	E	L	A	K	E	L	I	S	R	P	S	V	T	P	D	D	R	D	C	Q	K	L	X	A	E	R	L	H	K	I	G	F	A	A	E	E	X	H	F	G	N	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	W	L	R	R	.	G	T	K	A	P	V	V	C	F
Template Known Secondary structure		S											T	S			B	T	T			T	T											T	T	T								B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.		S	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																		.	.	.	.	.	.		.	.	.	60	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																																		.	.
Query SS confidence													.	.	.	.	.	.	.																																		.	.
Query Sequence		M	A	H	L	D	T	Y	A	P	L	S	.	.	.	.	.	.	.	D	A	D	A	D	A	N	L	G	G	L	T	L	Q	G	M	D	D	N	A	A	G	L	G	V	M	L	E	L	A	E	R	L	.	.	K	N	T	P	T	E	Y	G	I	R	F	V	A	T	S	G	E	E	E	G	K	L	G	A	E	N	L
Query Conservation													.	.	.	.	.	.	.																																		.	.
Alig confidence													.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		A	G	H	T	D	V	V	P	T	G	P	V	E	K	W	D	S	P	P	F	E	P	A	E	R	D	G	R	L	Y	G	R	G	A	A	D	X	K	T	S	I	A	C	F	V	T	A	C	E	R	F	V	A	K	H	P	N	H	Q	G	S	I	A	L	L	I	T	S	D	E	E	G	D	A	L	D	G	T	T	K
Template Known Secondary structure							B					S	G	G	G	S	S	S		T	T	S					T	T				S	T	T	T	T	T	T																			T	T		S	S								S		S	S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	M	S	D	T	E	K	K	N	T	L	L	V	I	N	L	D	N	L	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	D	V	L	K	A	R	D	E	L	I	D	Y	C	I	V	G	E	P	T	A	V	D
Template Known Secondary structure									T	T													B	S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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