 |
Job Description | P0AAJ8 | Confidence | 98.75% | Date | Thu Jan 5 11:13:07 GMT 2012 |
Rank | 38 | Aligned Residues | 54 |
% Identity | 30% | Template | d2fdna_ |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Short-chain ferredoxins
|
Resolution | 0.94 |
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | Y | I | K | K | Q | C | M | H | C | V | D | P | N | C | V | S | V | C | P | V | S | A | L | K | K | D | P | K | T | G | I | V | H | Y | D | K | D | V | C | T | G | C | R | Y | C | M | V | A | C | P | Y | N | V | P | K | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|   |
|   |
|
|
|
|
|   |
|   |   |
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|   |   |
|   | . | . |   |
|   |   |   |
|
|   |   |
|
|   |   | . | . |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
A | Y | V | I | N | E | A | C | I | S | C | G | . |
. |
A | C | E | P | E | C | P | V | N | A | I | S | S | . |
. |
G | D | D | R | Y | V | I | D | A | D | T | C | I | D | C | G | A | C | A | G | V | C | P | V | D | A | P | V | Q |
Template Known Secondary structure |   |
|  |  |  |
| T | T |
|
|
|
|
| . | . | T | T | G | G | G |
| T | T |
|
|  |  |
| . | . |
| S | S | S |
|  |  |
| T | T | T |
|
|
|
|
|  |  |  |  | T |
| T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | |
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|