Job Description P0AAJ8 Confidence 100.00% Date Thu Jan 5 11:13:07 GMT 2012 Rank 2 Aligned Residues 227 % Identity 30% Template d1kqfb1 SCOP info Ferredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins Resolution 1.60

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		P	S	V	S	H	A	A	A	E	N	R	P	P	I	P	G	S	L	G	M	L	Y	D	S	T	L	C	V	G	C	Q	A	C	V	T	K	C	Q	D	I	N	.	F	P	E	R	N	P	Q	G	E	Q	T	W	S	N	N	D	K	L	S	P	Y	T	N	N	I	I	Q	V	W	T	S	G	T	G	V	N	K	D
Query Conservation																																											.
Alig confidence																																											.																																		.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		A	T	N	S	I	T	P	P	S	Q	V	R	D	Y	K	A	E	V	A	K	L	I	D	V	S	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	W	N	D	I	R	D	E	V	G	H	C	V	G	V	Y	D	N	P	A	D	L	S	A	K	S	W	T	V	M	R	F	S	E	T	E	Q	.	.	.	.	.
Template Known Secondary structure		T			T	T	S					S													T	T	T																T									S	S	S	S			S	S	S		B	T	T	B	S										T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	E	N	G	Y	A	Y	I	K	K	Q	C	M	H	C	V	D	P	N	C	V	S	V	C	P	V	S	A	L	K	K	D	P	K	T	G	I	V	H	Y	D	K	D	V	C	T	G	C	R	Y	C	M	V	A	C	P	Y	N	V	P	K	Y	D	Y	N	N	P	F	G	A	L	H	K	C	E	L	C	N	Q
Query Conservation
Alig confidence																																																																	.	.														.	.
Template Conservation																																																																	.	.														.	.
Template Sequence		N	G	K	L	E	W	L	I	R	K	D	G	C	M	H	C	E	D	P	G	C	L	K	A	C	P	S	A	G	A	I	I	Q	Y	A	N	G	I	V	D	F	Q	S	E	N	C	I	G	C	G	Y	C	I	A	G	C	P	F	N	I	P	R	L	.	.	N	K	E	D	N	R	V	Y	K	C	T	L	C	.	.
Template Known Secondary structure		T	S	S									S				B	S	S									S	T	T	S					T	T	S						G	G	G												T	T						.	.		T	T	T	T							T	T	.	.
Template Predicted Secondary structure																																																																	.	.														.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		K	G	V	E	R	L	D	K	G	G	L	P	G	C	V	E	V	C	P	A	G	A	V	I	F	G	T	R	E	E	L	M	A	E	A	K	K	R	L	A	L	K	P	G	S	E	Y	H	Y	P	R	Q	T	L	K	S	G	D	T	Y	L	H	T	V	P	K	Y	Y	P	H	.	.	L	Y	G	E	K	E	G	G
Query Conservation																																																																								.	.
Alig confidence		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	V	D	R	V	S	V	G	Q	E	P	A	C	V	K	T	C	P	T	G	A	I	H	F	G	T	K	K	E	M	L	E	L	A	E	Q	R	V	A	K	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	Y	E	H	A	G	V	Y	N	P	E	G	V	G
Template Known Secondary structure		.	.					T	T	T										T	T	S																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		T	T							G	G	G	T
Template Predicted Secondary structure		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		258	.	260	.	.	.	.	.			.	.	.	.	270	.	.		.	.	.	.	.	.	.
Predicted Secondary structure										.	.								.
Query SS confidence										.	.								.
Query Sequence		G	T	Q	V	L	V	L	T	.	.	G	V	P	Y	E	N	L	.	D	L	P	K	L	D	D
Query Conservation										.	.								.
Alig confidence										.	.								.
Template Conservation
Template Sequence		G	T	H	V	M	Y	V	L	H	H	A	D	Q	P	E	L	Y	H	G	L	P	K	D	P	K
Template Known Secondary structure			B	S						T	T	T	T		G	G	G	T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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