 |
Job Description | P0AAJ8 | Confidence | 14.25% | Date | Thu Jan 5 11:13:07 GMT 2012 |
Rank | 87 | Aligned Residues | 49 |
% Identity | 14% | Template | c2ja1A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:thymidine kinase; |
PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor.
|
Resolution | 2.8 Å |
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | Y | A | Y | I | K | K | Q | C | M | H | C | V | D | P | N | C | V | S | V | C | P | V | S | A | L | K | K | D | P | K | T | G | I | V | H | Y | . |
. |
D | K | D | V | C | T | G | C | R | Y | C |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |
|   |   |
|   |
|
|
|   |
| . | . |
|   |
|   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
E | H | V | T | K | L | Q | A | V | C | S | V | C | G | S | P | A | S | R | T | Q | R | L | I | D | G | E | P | A | A | F | D | D | P | I | I | L | V | G | A | S | E | S | Y | E | P | R | C | R | H | C |
Template Known Secondary structure |   |
S |  |  |  |  |
|
|
| B |
| T | T | T |
| S | B |
|
|  |  |  |  |  |  | T | T |  |  |
|
| T | T |
|
| S |
|
| T | T |
|
|  |  |  |  |  |  |
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|