Job Description P0AAJ8 Confidence 100.00% Date Thu Jan 5 11:13:07 GMT 2012 Rank 3 Aligned Residues 251 % Identity 24% Template c2ivfB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum Resolution 1.88 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	G	M	L	Y	D	S	T	L	C	V	G	C	Q	A	C	V	T	K	C	Q	D	I	N	F	P	E	R	N	P	Q	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	V	T	V	I	D	L	N	K	C	L	G	C	Q	T	C	T	V	A	C	K	N	I	W	T	K	R	P	G	T	E	H	M	R	W	N	N	V	T	T	Y	P	G	K	G	Y	P	R	D	Y	E	R	K	G	G	G	F	L	R	G	E	P	Q	P	G	V	L	P	T	L	I	D	S	G	D	D	F	Q	F
Template Known Secondary structure									T	T	T																S		S	T	T		T	T			S	S						S	S		T	T	T	T	T	G	G	G	S	B		S			T	T					B					T	T	T	T	T				B
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
														71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	T	W	S	N	N	D	K	L	S	P	Y	T	N	N	I	I	Q	V	W	T	S	G	T	G	V	N	K	D	Q	E	E	N	G	Y	A	Y	I	K	K	Q	C	M	H	C	V	D	P	N	C	V	S	V	C	P	V	S	A	L	K	K	D	P	K	T	G	I	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	H	K	E	V	F	Y	E	G	K	G	Q	T	V	H	F	H	P	T	S	K	S	T	G	K	D	P	A	W	G	Y	N	W	D	E	D	Q	G	G	G	K	W	P	N	P	F	F	F	Y	L	A	R	M	C	N	H	C	T	N	P	A	C	L	A	A	C	P	T	G	A	I	Y	K	R	E	D	N	G	I	V
Template Known Secondary structure									S	S		G	G	G	S					B		T	T	T	S	S			S			T	T	T	T	T	T	T					T	T															S	S								T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	D	K	D	V	C	T	G	C	R	Y	C	M	V	A	C	P	Y	N	V	P	K	Y	D	Y	N	N	P	F	G	A	L	H	K	C	E	L	C	N	Q	K	G	V	E	R	L	D	K	G	G	L	P	G	C	V	E	V	C	P	A	G	A	V	I	F	G	T	R	E	E	L	M	A	E	A	K	K	R	L
Query Conservation
Alig confidence																										.	.														.	.	.	.
Template Conservation																										.	.														.	.	.	.
Template Sequence		L	V	D	Q	E	R	C	K	G	H	R	H	C	V	E	A	C	P	Y	K	A	I	Y	F	.	.	N	P	V	S	Q	T	S	E	K	C	I	L	C	.	.	.	.	Y	P	R	I	E	K	G	I	A	N	A	C	N	R	Q	C	P	G	R	V	R	A	F	G	Y	L	D	D	T	T	S	H	V	H	K	L	V
Template Known Secondary structure					T	T	T												T	T						.	.		T	T	T	T							T	T	.	.	.	.					T	T	T	B							T		T	T								T	T		T	T	S
Template Predicted Secondary structure																										.	.														.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		A	L	K	P	G	S	E	Y	H	Y	P	R	Q	T	L	K	S	G	D	T	Y	L	H	T	V	P	K	Y	Y	P	H	L	Y	G	E	K	E	G	G	.	G	T	Q	V	L	V	L	T	G	V	P	Y	E	N	L	D	L	P	K	L	D	D	L	S	T	G	A	R	S	E	N	I	Q	H	T	L	Y	K	G	M
Query Conservation																																									.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	W	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	P	L	H	A	E	Y	G	T	G	P	N	I	Y	Y	V	P	P	M	G	A	R	G	F	G	E	D	G	E	I	T	D	K	T	R	I	P	L	D	V	L	E	G	L	F	G	P	E	V
Template Known Secondary structure		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	G	G	G	S	S																	T	T	S	S						S	S											T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.																										.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	P	L	A	V	L	A	G	L	T	V	L	V	R	R	N	T	K	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	V	L	A	V	L	H	T	E	R	E	N	M	R	A	G	R	G	S	E
Template Known Secondary structure																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions