Job Description P0AAJ8 Confidence 98.39% Date Thu Jan 5 11:13:07 GMT 2012 Rank 47 Aligned Residues 90 % Identity 22% Template c2fugC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	S	T	L	C	V	G	C	Q	A	C	V	T	K	C	Q	D	I	N	F	P	E	R	N	P	Q	G	E	Q	T	W	S	N	N	D	K	L	S	P	Y	T	N	N	I	I	Q	V	W	T	S	G	T	G	V	N	K	D	Q	E	E	N	G	Y	A	Y	I	K	K	Q	C	M	H	C	V	D	P	N	C	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Sequence		L	D	R	E	R	C	I	H	C	K	R	C	V	R	Y	F	E	E	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	V	L	D	F	I	E	R	G	V	H	T	F	I	G	T	M	D	F	G	L	P	S	G	F	S	G	N	.	.	I	T
Template Known Secondary structure					S															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B	S		G	G	G		B				S	S	T	T			S	S			T		.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.
		122	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		S	V	C	P	V	S	A	L	K	K	D	.	.	P	K	T	G	I	V	H	Y	D	K	D	V	C	T	G	C	R	Y	C	M	V	A	C	P	Y	N	V
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		D	I	C	P	V	G	A	L	L	D	L	T	A	R	F	R	A	R	N	W	E	M	E	E	T	P	T	T	C	A	L	C	P	V	G	C	G	I	T	A
Template Known Secondary structure					S	S	S	S	S	B		G	G	G	S	S	S			T	T	T	S									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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