Job Description P0AAJ8 Confidence 100.00% Date Thu Jan 5 11:13:07 GMT 2012 Rank 1 Aligned Residues 273 % Identity 25% Template c1kqfB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli Resolution 1.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	P	S	V	S	H	A	A	A	E	N	R	P	P	I	P	G	S	L	G	M	L	Y	D	S	T	L	C	V	G	C	Q	A	C	V	T	K	C	Q	D	I	N	.	F	P	E	R	N	P	Q	G	E	Q	T	W	S	N	N	D	K	L	S	P	Y	T	N	N	I	I	Q	V	W	T	S	G	T	G	V	N	K
Query Conservation																																												.
Alig confidence																																												.																																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		S	A	T	N	S	I	T	P	P	S	Q	V	R	D	Y	K	A	E	V	A	K	L	I	D	V	S	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	W	N	D	I	R	D	E	V	G	H	C	V	G	V	Y	D	N	P	A	D	L	S	A	K	S	W	T	V	M	R	F	S	E	T	E	Q	.	.	.	.
Template Known Secondary structure		T	T			T	T	S					S													T	T	T																T									S	S	S	S			S	S	S		B	T	T	B	S										T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	E	E	N	G	Y	A	Y	I	K	K	Q	C	M	H	C	V	D	P	N	C	V	S	V	C	P	V	S	A	L	K	K	D	P	K	T	G	I	V	H	Y	D	K	D	V	C	T	G	C	R	Y	C	M	V	A	C	P	Y	N	V	P	K	Y	D	Y	N	N	P	F	G	A	L	H	K	C	E	L	C	N
Query Conservation
Alig confidence		.																																																																				.	.										.
Template Conservation		.																																																																				.	.										.
Template Sequence		.	N	G	K	L	E	W	L	I	R	K	D	G	C	M	H	C	E	D	P	G	C	L	K	A	C	P	S	A	G	A	I	I	Q	Y	A	N	G	I	V	D	F	Q	S	E	N	C	I	G	C	G	Y	C	I	A	G	C	P	F	N	I	P	R	L	N	K	E	D	.	.	N	R	V	Y	K	C	T	L	C	.
Template Known Secondary structure		.	T	S	S									S				B	S	S									S	T	T	S					T	T	S						G	G	G												T	T							T	T	T	.	.	T							T	T	.
Template Predicted Secondary structure		.																																																																				.	.										.
Template SS confidence
			88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		Q	K	G	V	E	R	L	D	K	G	G	L	P	G	C	V	E	V	C	P	A	G	A	V	I	F	G	T	R	E	E	L	M	A	E	A	K	K	R	L	A	L	K	P	G	S	E	Y	H	Y	P	R	Q	T	L	K	S	G	D	T	Y	L	H	T	V	P	K	Y	Y	P	H	.	.	L	Y	G	E	K	E	G
Query Conservation																																																																									.	.
Alig confidence		.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation		.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	V	D	R	V	S	V	G	Q	E	P	A	C	V	K	T	C	P	T	G	A	I	H	F	G	T	K	K	E	M	L	E	L	A	E	Q	R	V	A	K	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	Y	E	H	A	G	V	Y	N	P	E	G	V
Template Known Secondary structure		.	.	.					T	T	T										T	T	S																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		T	T							G	G	G
Template Predicted Secondary structure		.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																						.	.	.	.	210	.	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		G	G	T	Q	V	L	V	L	T	G	V	P	Y	E	N	L	D	L	P	K	L	D	D	L	S	T	G	A	R	S	E	N	I	Q	H	T	L	.	.	.	Y	K	G	M	M	L	P	L	A	V	L	A	G	L	T	V	L	V	R	R	N	T	K	N	D	H	H	D	G	G	D
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		G	G	T	H	V	M	Y	V	L	H	H	A	D	Q	P	E	L	Y	H	G	L	P	K	D	P	K	I	D	T	S	V	S	L	W	K	G	A	L	K	P	L	A	A	A	G	F	I	A	T	F	A	G	L	I	F	H	Y	I	G	I	G	P	N	K	E	V	D	D	D	E	E
Template Known Secondary structure		T		B	S						T	T	T	T		G	G	G	T	T	T			S	S												T	T																												S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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