 |
Job Description | P0AAJ8 | Confidence | 98.83% | Date | Thu Jan 5 11:13:07 GMT 2012 |
Rank | 35 | Aligned Residues | 59 |
% Identity | 22% | Template | c1gx7A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; |
PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase
|
Resolution | UNK |
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | Y | I | K | K | Q | C | M | H | C | V | D | P | N | C | V | S | V | C | P | V | S | A | L | K | K | D | P | K | T | G | I | V | H | Y | D | K | D | V | C | T | G | C | R | Y | C | M | V | A | C | P | Y | N | V | P | K | Y | D | Y | N |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|   |
|   |
|
|
|
|
|   |
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|
|   |
|   | . | . |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
V | Q | I | D | E | A | K | C | I | G | C | D | . |
. |
T | C | S | Q | Y | C | P | T | A | A | I | F | G | E | M | G | E | P | H | S | I | P | H | I | E | A | C | I | N | C | G | Q | C | L | T | H | C | P | E | N | A | I | Y | E | A | Q | S |
Template Known Secondary structure |   |
 |  |  |
| T | T | S |
|
| S |
|
| . | . | S | G | G | G | G |
| T | T | S |
|
| B |
|
| T | T | S |
|
| B |
|
|
| T | T | T | S |
| S |
|
| S | S | S | T | T | S | T | T |
|
|  |  |  | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|