Job Description P30014 Confidence 98.75% Date Thu Jan 5 11:45:43 GMT 2012 Rank 28 Aligned Residues 146 % Identity 13% Template d2hhva1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.55

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		8	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		T	G	L	C	D	R	F	R	G	F	Y	P	.	.	.	V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	N	G	I	D	P	N	D
Query Conservation														.	.	.
Alig confidence														.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	L	A	D	R	V	T	E	E	M	L	A	D	K	A	A	L	V	V	E	V	V	E	E	N	Y	H	D	A	P	I	V	G	I	A	V	.	.	.	.	.	.	.	.	.	.	.	.	V	N	E	H	G	R	F	F	L	R	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	S			G	G	G	G		S										S	S	S		T	T									.	.	.	.	.	.	.	.	.	.	.	.			T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.													.	.	340	.	.	.	.	.	.	.	.	.	350
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G	Q	T	V	L
Query Conservation
Alig confidence		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		.	.	.	.	.	A	L	A	D	P	Q	F	V	A	W	L	G	D	.	.	.	.	.	.	.	.	.	.	E	T	K	K	K	S	M	F	D	S	K	R	A	A	V	A	L	K	W	.	.	.	.	.	K	G	I	E	L	C	G	V	S	F	D	L	L	L	A	A	Y	L	L	D	P	A	Q	G	V	D	D	V
Template Known Secondary structure		.	.	.	.	.		T	T											.	.	.	.	.	.	.	.	.	.	T	T	S					S	S										T	.	.	.	.	.	T	T																			G	G	G				S
Template Predicted Secondary structure		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
							351	.	.	.	.	.	.	.	.	360	.	.	.											.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.						.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		165	.	.	.	.	170	.		.	.	.	.	.	.	.	.																		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	A	C	Q	T	A	.	G	M	D	F	D	S	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R
Query Conservation									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	A	K	M	K	Q	Y	E	A	V	R	P	D	E	A	V	Y	G	K	G	A	K	R	A	V	P	D	E	P	V	L	A	E	H	L	V	R	K	A	A	A	I	W	E	L	E	R	P	F	L	D	E	L	R	R
Template Known Secondary structure							T	T	T			S	S									S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions