Job Description P30014 Confidence 99.66% Date Thu Jan 5 11:45:43 GMT 2012 Rank 20 Aligned Residues 196 % Identity 13% Template d2d5ra1 SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.50

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		N	A	Q	L	T	G	L	C	D	R	F	R	G	F	Y	P	V	V	I	D	V	E	T	A	G	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	.	P	D	T	T	L	H	F	H
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		D	E	E	M	K	K	I	R	Q	V	I	R	K	Y	N	Y	V	A	M	D	T	E	F	P	G	V	V	A	R	P	I	G	E	F	R	S	N	A	D	Y	Q	Y	Q	L	L	R	C	N	V	D	L	L	K	I	I	Q	L	G	L	T	F	M	N	E	Q	G	E	Y	P	P	G	T	S	T	W	Q	F	N	F	K
Template Known Secondary structure																																	S			S	S														T	T													T	T	S				S	S								B
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	.	.	.	N	G	I	D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L
Query Conservation																		.	.	.
Alig confidence									.									.	.	.																.	.	.	.	.
Template Conservation									.																											.	.	.	.	.
Template Sequence		F	N	L	T	E	D	M	.	Y	A	Q	D	S	I	E	L	L	T	T	S	G	I	Q	F	K	K	H	E	E	E	G	I	E	T	.	.	.	.	.	Q	Y	F	A	E	L	L	M	T	S	G	V	V	L	C	E	G	V	K	W	L	S	F	H	S	G	Y	D	F	G	Y	L	I	K	I	L	T	N	S	N	L
Template Known Secondary structure				T	T	T	S		.													T											B			.	.	.	.	.									T	T	T	S	S	S	S	S	S						S	S														T	S
Template Predicted Secondary structure									.																											.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.														.
Query SS confidence													.	.	.	.	.	.	.	.														.
Query Sequence		K	R	N	P	F	H	P	F	A	T	F	.	.	.	.	.	.	.	.	D	T	A	A	L	A	G	L	A	L	G	Q	T	.	V	L	S	K	A	C	Q	T	A	G	M	D	F	D	S	T	Q	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R	L	G	G
Query Conservation													.	.	.	.	.	.	.	.														.
Alig confidence													.	.	.	.	.	.	.	.														.																	.
Template Conservation																																																			.
Template Sequence		P	E	E	E	L	D	F	F	E	I	L	R	L	F	F	P	V	I	Y	D	V	K	Y	L	M	K	S	C	K	N	L	K	G	G	L	Q	E	V	A	E	Q	L	E	L	E	R	I	G	P	.	Q	H	Q	A	G	S	D	S	L	L	T	G	M	A	F	F	K	M	R	E	M	F	F	E	D	H	I
Template Known Secondary structure			S	S													S									G	G	G		T	T			S	S									T					S	S	.	T	T	S																			T	S		S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions