Job Description P30014 Confidence 99.76% Date Thu Jan 5 11:45:43 GMT 2012 Rank 19 Aligned Residues 194 % Identity 12% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		N	A	Q	L	T	G	L	C	D	R	F	R	G	F	Y	P	V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	.	.	.	.	.	.	.	.	.	.	.	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	.	H	V	E	P	F	V	G	A	N	L	Q
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation
Template Sequence		Y	S	E	F	A	V	I	R	Q	L	V	S	Q	Y	N	H	V	S	I	S	T	E	F	V	G	S	K	V	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P	D	N	G	P	S	T	W	Q	F	N	F	E	F	D	P	K	K	E	I	M	S
Template Known Secondary structure												T	T	T	S																										T	T													T	T					S	S	S		S						B				T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		72	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure								.	.	.																																																																					.	.	.
Query SS confidence								.	.	.																																																																					.	.	.
Query Sequence		P	E	A	L	A	F	.	.	.	N	G	I	D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	.	.	.
Query Conservation								.	.	.																																																																					.	.	.
Alig confidence								.	.	.																.	.	.	.	.																																																	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		T	E	S	L	E	L	L	R	K	S	G	I	N	F	E	K	H	E	N	L	G	I	D	V	.	.	.	.	.	F	E	F	S	Q	L	L	M	D	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	A	Y	D	L	G	F	L	I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	W	W
Template Known Secondary structure											T	T											B			.	.	.	.	.									T	S	S		S	S		T	T	S					S	S	T	T											T	T	S				S	S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
										146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G	Q	T	V	L	S	K	A	C	Q	T	A	G	M	D	F	D	S	T	Q	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																		.
Template Conservation																																											.
Template Sequence		V	H	Q	Y	M	P	N	F	Y	D	L	N	L	V	Y	K	I	I	Q	E	F	K	N	Q	Y	S	L	T	T	L	A	D	E	L	G	L	P	R	F	S	I	.	F	T	T	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K	L	S	M	H
Template Known Secondary structure							S	S												T	T	T					S								T	T					G	G	.	G	G	S																			T	T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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