Return to main results Retrieve Phyre Job Id

Job DescriptionP30014
Confidence97.23%DateThu Jan 5 11:45:43 GMT 2012
Rank43Aligned Residues166
% Identity13%Templated1ih7a1
SCOP infoRibonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease
Resolution2.21

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30. ........40.........50.........60.........70.........80.........
Predicted Secondary structure 






......





















....
Query SS confidence 











. . . . . .

























































. . . .
Query Sequence  VVIDVETAGFNA. . . . . . KTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGA. . . .
Query Conservation 



 




  ......    






       
 
         
 
     
      
 

    
    ....
Alig confidence 











......















......



































....
Template Conservation    



     


 
    
 

 

       ......                                        
Template Sequence  ANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDD. . . . . . RFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIID
Template Known Secondary structure 

SSS


TTT

S
TTTT......


TT






S
TTTT




T
Template Predicted Secondary structure 

















......































Template SS confidence 















































































   111........120.........130.........140.... .....150.........160.........170.........180....
 
   90.........100.........110.........120.. .......130........
Predicted Secondary structure  .......








.


.......................
Query SS confidence  . . . . . . .
































.















. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . VSEYEALHEIFKVVRKGIKASGCNRAIMVAHNA. NFDHSFMMAAAERASL. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  .......             
             

 

 . 

   
         .......................
Alig confidence  .......
















......









.















.......................
Template Conservation     
  
  
  

  
   
   ......




 
 
   





  
   
        
                
Template Sequence  KIIYMPFDNEKELLMEYLNFWQQK. . . . . . TPVILTGWNVESFDIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYG
Template Known Secondary structure  TSSS......

STTTTTT
GGGSTTS

SS
Template Predicted Secondary structure 



......





























Template SS confidence 















































































   185....190.........200........ .210.........220.........230.........240.........250........
 
   139140.........150.... .....160......... 170......... 180.........190.......
Predicted Secondary structure  .....






.






.








..............


Query SS confidence  . . . . .















.














.









. . . . . . . . . . . . . .

















Query Sequence  . . . . . KRNPFHPFATFDTAAL. AGLALGQTVLSKACQ. TAGMDFDSTQ. . . . . . . . . . . . . . AHSALYDTERTAVLFCEI
Query Conservation  .....                .         
  
  .  

      ..............

 

 

  

 
   
Alig confidence  .....















.














.









..............

















Template Conservation        
 


 

     
      
 



  

   

  
 
    
          
  
 
 

 
   
  

Template Sequence  SREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKR
Template Known Secondary structure  TT
SS


S

ST






SS
GGG
Template Predicted Secondary structure 





















Template SS confidence 















































































   259260.........270.........280.........290.........300.........310.........320.........330........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions