Job Description P30014 Confidence 100.00% Date Thu Jan 5 11:45:43 GMT 2012 Rank 9 Aligned Residues 169 % Identity 27% Template c2p1jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima Resolution 2.50 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	N	G	I	D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E
Query Conservation
Alig confidence																																.	.	.	.	.															.	.																					.
Template Conservation																																.	.	.	.	.															.	.																					.
Template Sequence		F	V	V	L	D	F	E	T	T	G	L	D	P	Q	V	D	E	I	I	E	I	G	A	V	K	I	Q	G	G	Q	.	.	.	.	.	I	V	D	E	Y	H	T	L	I	K	P	S	R	E	.	.	I	S	R	K	S	S	E	I	T	G	I	T	Q	E	M	L	E	N	K	R	.	S	I	E	E	V	L	P	E
Template Known Secondary structure										S	S	S		T	T	T													T	T		.	.	.	.	.												S	S		.	.																	T	T			.
Template Predicted Secondary structure																																.	.	.	.	.															.	.																					.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.						.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G	Q	T	V	L	S	K	A	C	Q	T	A	G	M	D	F	D	S	T
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																.																																		.
Template Conservation							.	.	.	.	.	.	.	.	.																																.																																		.
Template Sequence		F	L	G	F	L	.	.	.	.	.	.	.	.	.	E	D	S	I	I	V	A	H	N	A	N	F	D	Y	R	F	L	R	L	W	I	K	K	V	M	G	L	D	W	E	R	.	P	Y	I	D	T	L	A	L	A	K	S	L	L	K	L	R	S	Y	S	L	D	S	V	V	E	K	L	G	L	G	P	F	R	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	S	S						T	T																							.																S												T						.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																.																																		.
Template SS confidence
		430	.	.	.	.										.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R	L	G	G	W
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	H	H	R	A	L	D	D	A	R	V	T	A	Q	V	F	L	R	F	V	E	M	M	K	K	E	G	H	H
Template Known Secondary structure		.		S																				T	T	S	T	T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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