Job Description P30014 Confidence 99.07% Date Thu Jan 5 11:45:43 GMT 2012 Rank 26 Aligned Residues 167 % Identity 16% Template c2kzzA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: klenow fragment with normal substrate and zinc only Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	D	N	A	Q	L	T	G	L	C	D	R	F	R	G	F	Y	P	V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	N	G	I
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		I	L	D	E	E	T	L	K	A	W	I	A	K	L	E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	.	.	.	.	.	.	.	.	.	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S												T	T	S	S	S								S		S		T	T	T												.	.	.	.	.	.	.	.	.	T	T											S	T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.										.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																				.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																				.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	.	.	.	.	.	.	.	E	D	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	.	.	.	.	A	N	Y	G	I	E	L	R	G	I	.	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	T		T	T	S					S	S									.	.	.	.		T	T	T							.													T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																				.	.	.	.											.
Template SS confidence
										395	.	.	.	.	400	.	.	.	.	.	.	.	.	.								410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.					.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		161	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.																					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	L	S	K	A	C	Q	.	T	A	G	M	D	F	D	S	T	Q	A	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R	L	G
Query Conservation											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H	K
Template Known Secondary structure				S									S													S	S	T	T				G	G	G	S																											T	T	S
Template Predicted Secondary structure
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions