Job Description P30014 Confidence 81.86% Date Thu Jan 5 11:45:43 GMT 2012 Rank 53 Aligned Residues 106 % Identity 13% Template c2dtuA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the beta hairpin loop deletion variant2 of rb69 gp43 in complex with dna containing an abasic site3 analog Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure														.	.	.	.	.	.																																																												.	.	.
Query SS confidence														.	.	.	.	.	.																																																												.	.	.
Query Sequence		V	V	I	D	V	E	T	A	G	F	N	A	.	.	.	.	.	.	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	N	G	I	D	P	N	D	P	D	R	G	A	V	.	.	.
Query Conservation														.	.	.	.	.	.																																																												.	.	.
Alig confidence														.	.	.	.	.	.																	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																																				.	.	.	.	.	.	.
Template Sequence		A	N	F	D	I	E	V	T	S	P	D	G	F	P	E	P	S	Q	A	K	H	P	I	D	A	I	T	H	Y	D	S	I	D	D	.	.	.	.	.	.	.	R	F	Y	V	F	D	L	L	N	S	P	Y	G	N	V	E	E	W	S	I	E	I	A	A	K	L	Q	E	Q	G	G	D	E	V	P	S	E	I	I
Template Known Secondary structure											S	S	S	S			T	T	T			S										T	T	T	T	.	.	.	.	.	.	.											T	T													S		G	G	G	T						T	T	T	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
											91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																	.
Query Sequence		.	.	.	.	.	.	.	.	.	S	E	Y	E	A	L	H	E	I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	.	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L
Query Conservation		.	.	.	.	.	.	.	.	.																																	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.											.
Template Conservation																											.	.	.	.	.	.
Template Sequence		D	K	I	I	Y	M	P	F	D	N	E	K	E	L	L	M	E	Y	L	N	F	W	Q	Q	K	.	.	.	.	.	.	T	P	V	I	L	T	G	W	N	V	E	S	F	A	I	P	Y	V	Y	N	R	I	K	N	I	F	G
Template Known Secondary structure		G	G							S	S															T	.	.	.	.	.	.			S					S	S	T	T	T	T													S
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions