Job Description P30014 Confidence 98.70% Date Thu Jan 5 11:45:43 GMT 2012 Rank 29 Aligned Residues 146 % Identity 20% Template c1tk0A_ PDB info PDB header:transferase/electron transport/dna Chain: A: PDB Molecule:dna polymerase; PDBTitle: t7 dna polymerase ternary complex with 8 oxo guanosine and2 ddctp at the insertion site Resolution 2.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	N	G	I	D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	S	D	I	E	A	N	A	L	L	E	S	V	T	K	F	H	C	G	V	I	Y	D	Y	S	T	A	E	.	.	.	.	.	.	.	.	.	.	Y	V	S	Y	R	P	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S		G	G	G												T	T	T	T		.	.	.	.	.	.	.	.	.	.						G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30											.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.
Predicted Secondary structure																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	.	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	A	Y	L	D	A	L	E	A	E	V	A	R	G	G	L	I	V	F	H	N	G	H	K	Y	D	V	P	A	L	T	K	L	A	K	L	Q	L	N	R	E	F	H	L	P	R	E	N	C	I	D	T	L	V	L	S	R	L	I	H	S	N	L	K	D	T	D	M	G	L	L	R	S	G	K	L	P	G	A
Template Known Secondary structure															T	T						S	S	T	T	T	T																					G	G	G												T	T	T	S				T	T	T	T	S		G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.																												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	K	A	C	Q	T	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	F	D	S	T	Q	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R	L	G	G	W	P
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	A	W	G	Y	R	L	G	E	M	K	G	E	Y	K	D	D	F	K	R	M	L	E	E	Q	G	E	E	Y	V	D	G	M	E	W	W	N	F	N	E	E	M	M	D	Y	N	V	Q	D	V	V	V	T	K	A	L	L	E	K	L	L	S	D	K	H	Y	F	P	P	E	I
Template Known Secondary structure																										T	S	S					T	T	G	G	G	T	S																									T		T	T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions