Job Description P30014 Confidence 98.89% Date Thu Jan 5 11:45:43 GMT 2012 Rank 27 Aligned Residues 145 % Identity 17% Template c1njzA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase i; PDBTitle: cytosine-thymine mismatch at the polymerase active site Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	A	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F	N	G	I	D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	L	V	V	E	V	V	E	E	N	Y	H	D	A	P	I	V	G	I	A	V	.	.	.	.	.	.	.	.	.	.	.	.	V	N	E	H	G	R	F	F	L	R	P	E	T	A	L	A	D	P	Q	F	V	A	W	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S	S		T	T									.	.	.	.	.	.	.	.	.	.	.	.			T	T											T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.													.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G	Q	T	V	L	S	K	A	C	Q	T	A	G	M	D	F	D	S	T	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	K	K	K	S	M	F	D	S	K	R	A	A	V	A	L	K	W	.	.	.	.	K	G	I	E	L	C	G	V	.	S	F	D	L	L	L	A	A	Y	L	L	D	P	A	Q	G	V	D	D	V	A	A	A	A	K	M	K	Q	Y	E	A	V	R	P	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S					S	S											.	.	.	.	T	T							.													G	G	G				S							T	T	T			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.									.
Template SS confidence
															364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		180																			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R	L	G	G	W	P	L	S	A	A	E	E
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	V	Y	G	K	G	A	K	R	A	V	P	D	E	P	V	L	A	E	H	L	V	R	K	A	A	A	I	W	E	L	E	R	P	F	L	D	E	L	R	R	N	E	Q	D	R	L	L	V	E	L	E
Template Known Secondary structure							S	G	G	G																																		T	T								T
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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