Job Description P30014 Confidence 66.07% Date Thu Jan 5 11:45:43 GMT 2012 Rank 55 Aligned Residues 74 % Identity 22% Template c1cmwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: crystal structure of taq dna-polymerase shows a new2 orientation for the structure-specific nuclease domain Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L	A	L	G	Q	T	V	L	S	K	A	C	Q	T	A	G	M	D	F	D	S	T	Q	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I
Query Conservation
Alig confidence															.	.	.											.	.														.	.																			.	.	.	.
Template Conservation															.	.	.											.	.														.	.																			.	.	.	.
Template Sequence		A	R	G	L	L	A	K	D	L	S	V	L	A	.	.	.	L	R	E	G	L	G	L	P	P	G	.	.	D	D	P	M	L	L	A	Y	L	L	D	P	S	.	.	N	T	T	P	E	G	V	A	R	R	Y	G	G	E	W	T	E	E	.	.	.	.	A	G	E	R	A	A	L	S	E	R	L	F	A	N	L
Template Known Secondary structure		B		S	T	T									.	.	.			T	T					B		.	.												T	T	.	.			S								T	S					S		.	.	.	.
Template Predicted Secondary structure															.	.	.											.	.														.	.																			.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		198	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	R	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	G	R	L	E
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions