Job Description P75817 Confidence 99.56% Date Thu Jan 5 12:14:29 GMT 2012 Rank 68 Aligned Residues 152 % Identity 27% Template c3m6wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		A	T	A	R	D	W	V	R	Q	L	P	V	K	H	M	W	D	L	F	C	G	V	G	G	F	G	L	H	C	A	T	.	.	.	P	D	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	R	L	Q	F	Q	A	L	D	S	T	Q	F	A	T	A	Q	G	D
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																															.
Template Conservation																																																																		.
Template Sequence		Q	A	V	G	V	L	L	D	P	K	P	G	E	R	V	L	D	L	A	A	A	P	G	G	K	T	T	H	L	A	A	R	M	G	G	K	G	L	L	L	A	N	E	V	D	G	K	R	V	R	G	L	L	E	N	V	E	R	W	G	A	P	L	A	.	V	T	Q	A	P	P	R	A	L	A	E	A	F	G	T
Template Known Secondary structure												T	T						S	S		T	T											T	T	T		S							S																					.				S											S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																									.	.	.	.	.	320	.	.	.	.		.	.		.	.	.	330	.	.	.	.							.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.			.									.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.			.									.	.	.	.	.	.
Query Sequence		V	P	E	L	V	L	V	N	P	P	R	R	G	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	L	C	D	Y	L	S	T	M	.	A	P	.	R	F	I	I	Y	S	S	C	.	.	.	.	.	.	N	A	Q	T	M	A	K	D	I	R	E	L	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.			.									.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.			.									.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	H	R	V	L	L	D	A	P	C	S	G	E	G	M	F	R	K	D	R	E	A	A	R	H	W	G	P	S	A	P	K	R	M	A	E	V	Q	K	A	L	L	A	Q	A	S	R	L	L	G	P	G	G	V	L	V	Y	S	T	C	T	F	A	P	E	E	N	E	G	V	V	A	H	F	L	K	A	H	P
Template Known Secondary structure															G	G	G	T	T	T		T	T	S	G	G	G			T	T																		T	T												S				G	G	G	T												T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.																						.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		G	F	R	I	E	R	V	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	M	F	P	H	T	A	H	Y	E	.	.	V	L	T	L	L	V	K	Q
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		E	F	R	L	E	D	A	R	L	H	P	L	F	A	P	G	V	P	E	W	G	E	G	N	P	E	L	L	K	T	A	R	L	W	P	H	R	L	E	G	E	G	H	F	L	A	R	F	R	K	E
Template Known Secondary structure		T									S	T	T	S					G	G	G	T	T	T		G	G	G	G	G	S					T	T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions