Job Description P75817 Confidence 46.79% Date Thu Jan 5 12:14:29 GMT 2012 Rank 457 Aligned Residues 88 % Identity 13% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		242	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure														.	.	.	.																																								.	.	.
Query SS confidence														.	.	.	.																																								.	.	.
Query Sequence		C	G	V	G	G	F	G	L	H	C	A	T	.	.	.	.	P	D	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	R	L	Q	F	Q	A	L	D	S	T	Q	.	.	.	F	A	T	A	Q	G	D	V	P	E	L	V	L	V	N	P	P	R	R	G	I	G
Query Conservation														.	.	.	.																																								.	.	.
Alig confidence														.	.	.	.																						.	.	.	.	.	.													.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		I	G	G	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	K	K	.	.	.	.	.	.	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T	P	R	D	E	V	N
Template Known Secondary structure																		T	T								S												.	.	.	.	.	.	S	S	S					S		T	T	S								T			T	T								S
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	C	D	Y	L	S	T	M	A	P	R	F	I	I	Y	S	S	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	I	A	Q	L	V	M	K	D	F	G	V	K	R	V	V	S	L	V	N
Template Known Secondary structure											T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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