Job Description P75817 Confidence 99.59% Date Thu Jan 5 12:14:29 GMT 2012 Rank 60 Aligned Residues 205 % Identity 8% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	Q	L	K	V	I	T	V	N	I	Q	P	V	H	M	A	I	M	E	G	E	T	E	I	Y	L	T	E	Q	Q	A	L	A	E	R	F	N	D	V	P	L	W	I	R	P	Q	S	F	F	Q	T	N	P	A	V	A	S	Q	L	Y	A	T	A	R	D	W	V	R	Q	L	P	V	K	H	M	W	D	L
Query Conservation
Alig confidence																																				.	.										.	.	.	.	.
Template Conservation																																				.	.										.	.	.	.	.
Template Sequence		N	M	E	N	I	Y	E	C	E	F	N	D	G	S	F	R	L	C	T	R	N	L	V	P	N	F	N	V	Y	G	E	R	L	I	.	.	K	Y	E	G	V	E	Y	R	E	.	.	.	.	.	W	N	A	F	R	S	K	L	A	G	A	I	L	K	G	L	K	T	N	P	I	R	K	G	T	K	V	L	Y	L
Template Known Secondary structure		S	S	T	T							T	T										S	S		S				S	S	S				.	.			T	T						.	.	.	.	.			T	T	T									T	T		S						T	T
Template Predicted Secondary structure																																				.	.										.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		F	C	G	V	G	G	F	G	L	H	C	A	T	.	.	.	P	D	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	R	L	Q	F	Q	A	L	D	S	T	Q	F	A	T	A	Q	G	D	V	P	E	L	V	L	V	N	P	P	R	R	G	I	G	K	P	L
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	P	N	I	F	P	L	L	A	D	A	R	F	P	Q	S	Y	K	S	V	V	E	N	V	D	V	L	Y	V	D	I	A	Q	P	D	Q	T	D	I	A
Template Known Secondary structure		T		T	T	S												T	T	S																							T	T								T	T		G	G	G	T	T	T	T												S		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		318	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.							.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure									.													.	.	.	.	.	.											.	.
Query SS confidence									.													.	.	.	.	.	.											.	.
Query Sequence		C	D	Y	L	S	T	M	.	A	P	R	F	I	I	Y	S	S	C	N	A	.	.	.	.	.	.	Q	T	M	A	K	D	I	R	E	L	.	.	P	G	F	R	I	E	R	V	Q	L	F	D	M	F	P	H	T	A	H	Y	E	V	L	T	L	L	V	K	Q
Query Conservation									.													.	.	.	.	.	.											.	.
Alig confidence									.													.	.	.	.	.	.											.	.																			.	.	.
Template Conservation																																																										.	.	.
Template Sequence		I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	Y	K	T	E	V	E	K	L	E	N	S	N	F	E	T	I	Q	I	I	N	L	D	P	Y	D	K	D	H	.	.	.	A	I	V	L	S	K	Y	K
Template Known Secondary structure																									S	S	S	S	S	T	T								T	T	T										T	T	T	S	S	S		.	.	.
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions