 |
Job Description | P75817 | Confidence | 40.07% | Date | Thu Jan 5 12:14:29 GMT 2012 |
Rank | 483 | Aligned Residues | 99 |
% Identity | 12% | Template | c3hn2A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; |
PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from geobacter2 metallireducens gs-15
|
Resolution | 2.50 Å |
|
 |
  |   |
236 | . | . | . | 240 | . | . | . | . | |
. | . | |
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . |
|  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | M | W | D | L | F | C | G | V | . |
G | G | . |
F | G | L | H | C | A | T | P | D | M | Q | L | T | G | I | E | I | A | S | E | A | I | A | C | A | K | Q | S | A | A | E | L | G | L | T | R | L | Q | F | Q | A | L | D | S | T | Q | F | A | T | A | Q | G | D | V | P | E | L | V | L | V | N | P | P | R | R | G | I |
Query Conservation |   |
  |
|
|
|
|   |
|
|   | . |
|   | . |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   | . |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |
Template Sequence |   |
R | I | A | I | V | G | A | G | A | L | G | L | Y | Y | G | A | L | L | Q | R | S | G | E | D | V | H | F | L | L | R | R | D | . |
Y | E | A | I | A | G | N | G | L | K | V | F | S | I | N | G | D | F | T | L | P | H | V | K | G | Y | R | A | P | E | E | I | G | P | M | D | L | V | L | V | G | L | K | T | F | A | N |
Template Known Secondary structure |   |
|  |  |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |
| S | T | T | . |  |  |  |  |  |  | T |
|  |  |  |  |  | T | T |
|
|  |  |  | S |
|
|
|  |  | S |
|  |  |  |  |
|
|
| S |  |  |  |  |
|
|
| G | G | G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | P | L | C | D | Y | L | S | T | M | A | P | R | F | I | I | Y | S | S | C | N |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
Template Sequence |   |
S | R | Y | E | E | L | I | R | P | L | V | E | E | G | T | Q | I | L | T | L | Q | N |
Template Known Secondary structure |   |
G | G |  |  |  |  |  | G | G | G |
|
| T | T |
|  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|