Job Description P75817 Confidence 99.56% Date Thu Jan 5 12:14:29 GMT 2012 Rank 70 Aligned Residues 153 % Identity 17% Template c3eeyJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum Resolution 2.20 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																								.	.	.																											.
Query SS confidence																																								.	.	.																											.
Query Sequence		V	A	S	Q	L	Y	A	T	A	R	D	W	V	R	Q	L	P	V	K	H	M	W	D	L	F	C	G	V	G	G	F	G	L	H	C	A	T	P	.	.	.	D	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	.	T	R	L	Q	F	Q	A	L	D	S	T	Q
Query Conservation																																								.	.	.																											.
Alig confidence																.	.																							.	.	.																											.
Template Conservation																.	.
Template Sequence		S	L	G	Q	S	H	D	Y	I	K	M	F	V	K	.	.	E	G	D	T	V	V	D	A	T	C	G	N	G	N	D	T	A	F	L	A	S	L	V	G	E	N	G	R	V	F	G	F	D	I	Q	D	K	A	I	A	N	T	T	K	K	L	T	D	L	N	L	I	D	R	V	T	L	I	K	D	G	H	Q	N
Template Known Secondary structure																.	.	T	T						S			T	T	S												T	T								S															T	T		G	G	G						S		G	G	G
Template Predicted Secondary structure																.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310													.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.										.	.	.	340	.	.	.	.	.	.			.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.
Query Sequence		F	A	T	A	Q	G	D	V	P	E	L	V	L	V	N	P	P	R	.	.	.	.	.	.	.	.	.	.	.	.	R	G	I	G	K	P	L	C	D	Y	L	S	T	M	A	P	R	F	I	I	Y	S	S	C	N	A	.	.	.	.	.	.	.	.	.	Q	T	M	A	K	D	I	R	E	L	.	.	P	G	F
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		M	D	K	Y	I	D	C	P	V	K	A	V	M	F	N	L	G	Y	L	P	S	G	D	H	S	I	S	T	R	P	E	T	T	I	Q	A	L	S	K	A	M	E	L	L	V	T	G	G	I	I	T	V	V	I	Y	Y	G	G	D	T	G	F	E	E	K	E	K	V	L	E	F	L	K	G	V	D	Q	K	K	F
Template Known Secondary structure		G	G	G	T			S										S			T	T	S		S	S																																	S	S	S														T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	R	V	Q	L	F	D	M	F	P	H	T	A	H	Y	E	V	L	T	L	L	V	K
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		I	V	Q	R	.	.	.	T	D	F	I	N	Q	A	N	C	P	P	I	L	V	C	I	E	K
Template Known Secondary structure						.	.	.				T	T			S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		164	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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