Job Description P75817 Confidence 72.47% Date Thu Jan 5 12:14:29 GMT 2012 Rank 373 Aligned Residues 86 % Identity 13% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																		.																.	.	.	.	.														.
Query SS confidence																				.	.	.																		.																.	.	.	.	.														.
Query Sequence		F	G	L	H	C	A	T	P	D	M	Q	L	T	G	I	E	I	A	.	.	.	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	.	R	L	Q	F	Q	A	L	D	S	T	Q	F	A	T	A	.	.	.	.	.	Q	G	D	V	P	E	L	V	L	V	N	P	P	.	R	R	G	I	G	K	P
Query Conservation																				.	.	.																		.																.	.	.	.	.														.
Alig confidence																				.	.	.																		.																.	.	.	.	.														.
Template Conservation
Template Sequence		L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	Y	H	I	E	V	F	G	N	P	Q	E	K	D	A	I	K	L	A	K	E	G	V	D	Y	F	K	S	K	G	V	D	I	I	I	V	D	T	A	G	R	H	K	E	D	K	A
Template Known Secondary structure								T	T	T											S	S	T											G	G	G	T							T	T																		T	T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		L	C	D	Y	L	S	T	M	.	.	.	.	A	P	R	F	I	I	Y	S
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	I	E	E	M	K	Q	I	S	N	V	I	H	P	H	E	V	I	L	V
Template Known Secondary structure																S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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