Job Description P75817 Confidence 98.87% Date Thu Jan 5 12:14:29 GMT 2012 Rank 230 Aligned Residues 128 % Identity 15% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		219	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																								.	.																										.	.	.	.
Query SS confidence														.	.	.																								.	.																										.	.	.	.
Query Sequence		S	Q	L	Y	A	T	A	R	D	W	V	R	.	.	.	Q	L	P	V	K	H	M	W	D	L	F	C	G	V	G	G	F	G	L	H	C	A	T	.	.	P	D	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	.	.	.	.	G	L	T	R	L	Q	F	Q	A	L	D
Query Conservation														.	.	.																								.	.																										.	.	.	.
Alig confidence														.	.	.																								.	.																										.	.	.	.
Template Conservation
Template Sequence		E	F	V	Y	H	E	V	L	G	H	T	S	L	C	S	H	P	K	P	E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D
Template Known Secondary structure															T	T	S	S											T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure										.										.	.	.																			.											.	.	.	.	.
Query SS confidence										.										.	.	.																			.											.	.	.	.	.
Query Sequence		S	T	Q	F	A	T	A	Q	.	G	D	V	P	E	L	V	L	V	.	.	.	N	P	P	R	R	G	I	G	K	P	L	C	D	Y	L	S	T	M	.	A	P	R	F	I	I	Y	S	S	C	.	.	.	.	.	N	A	Q	T	M	A	K	D	I	R	E	L
Query Conservation										.										.	.	.																			.											.	.	.	.	.
Alig confidence										.										.	.	.																			.											.	.	.	.	.
Template Conservation
Template Sequence		G	L	A	F	V	R	Q	T	P	D	N	T	Y	D	V	V	I	I	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	P	D	G	I	C	C	N	Q	G	E	S	I	W	L	D	L	E	L	I	E	K	X	S	R	F	I
Template Known Secondary structure								T	S		T	T										S						S	S																									T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions