Job Description P75817 Confidence 98.39% Date Thu Jan 5 12:14:29 GMT 2012 Rank 267 Aligned Residues 144 % Identity 11% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																						.	.																				.	.	.	.	.
Query SS confidence																																						.	.																				.	.	.	.	.
Query Sequence		S	Q	L	Y	A	T	A	R	D	W	V	R	Q	L	P	V	K	H	M	W	D	L	F	C	G	V	G	G	F	G	L	H	C	A	T	P	.	.	D	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	.	.	.	.	.	S	A	A	E	L	G	L	T	R	L	Q	F	Q	A	L	D	S	T
Query Conservation																																						.	.																				.	.	.	.	.
Alig confidence														.	.																							.	.																				.	.	.	.	.																	.	.
Template Conservation														.	.																																																																	.	.
Template Sequence		E	M	M	T	H	V	P	L	L	A	H	G	.	.	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	V	N	.	.
Template Known Secondary structure												S	S	.	.									S			S	S							T	T		T	T									S												S					T	T		T	T		T	T								.	.
Template Predicted Secondary structure														.	.																																																																	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																			.											.	.	.	.	.													.
Query SS confidence																																			.											.	.	.	.	.													.
Query Sequence		Q	F	A	T	A	Q	G	D	V	P	E	L	V	L	V	N	P	P	R	R	G	I	G	K	P	L	C	D	Y	L	S	T	M	.	A	P	R	F	I	I	Y	S	S	C	.	.	.	.	.	N	A	Q	T	M	A	K	D	I	R	E	L	.	P	G	F	R	I	E	R	V	Q	L	F	D	M	F	P	H	T	A
Query Conservation																																			.											.	.	.	.	.													.
Alig confidence		.	.	.	.																	.	.	.	.	.									.											.	.	.	.	.													.
Template Conservation		.	.	.	.																	.	.	.	.	.
Template Sequence		.	.	.	.	Q	T	S	Q	T	F	D	V	I	I	S	D	C	T	S	A	.	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K	L	S	H	Y	F	S	D	V	G	F	Y	Q	A	A	I	P	T	Y	Y	G
Template Known Secondary structure		.	.	.	.		T	T												T	T	.	.	.	.	.								T															S	S														T	T		S										T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.																	.	.	.	.	.
Template SS confidence
						147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	E	V	L	T	L	L	V	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	M	T	F	A	W	A	T	D	N
Template Known Secondary structure		S									S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions