Job Description P75817 Confidence 41.36% Date Thu Jan 5 12:14:29 GMT 2012 Rank 478 Aligned Residues 86 % Identity 14% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																											.	.	.	.	.																				.
Query SS confidence																				.	.	.																											.	.	.	.	.																				.
Query Sequence		F	G	L	H	C	A	T	P	D	M	Q	L	T	G	I	E	I	A	.	.	.	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	R	L	Q	F	Q	A	L	D	S	.	.	.	.	.	T	Q	F	A	T	A	Q	G	D	V	P	E	L	V	L	V	N	P	P	.	R	R	G	I	G	K	P	L
Query Conservation																				.	.	.																											.	.	.	.	.																				.
Alig confidence																				.	.	.																											.	.	.	.	.																				.
Template Conservation
Template Sequence		L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	R	T	K	S	P	V	D	I	V	K	E	G	M	E	K	F	K	K	A	D	V	L	I	I	D	T	A	G	R	H	K	E	E	K	G	L
Template Known Secondary structure																			S				T	T	G	G	G	S	S							S	S							S	S	S			S	S	S	T	T							T	T	S	S		S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.					.	.	.	.	.	330	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		C	D	Y	L	S	T	M	.	.	.	.	A	P	R	F	I	I	Y	S
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		L	E	E	M	K	Q	I	K	E	I	T	N	P	D	E	I	I	L	V
Template Known Secondary structure								T	T	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions