Job Description P75817 Confidence 99.57% Date Thu Jan 5 12:14:29 GMT 2012 Rank 65 Aligned Residues 174 % Identity 14% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	W	L	H	E	Q	L	P	Q	L	K	V	I	T	V	N	I	Q	P	V	H	M	A	I	M	E	G	E	T	E	I	Y	L	T	E	Q	Q	A	L	A	E	R	F	N	D	V	P	L	W	I	R	P	Q	S	F	F	Q	T	N	P	A	V	A	S	Q	L	Y	A	T	A	R	D	W	V	R	Q	L	P	V
Query Conservation
Alig confidence																																																																					.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		A	E	Q	X	L	A	D	Y	A	P	L	N	K	V	D	S	A	R	R	C	G	L	Y	F	G	R	L	E	K	Q	P	V	F	D	A	E	K	F	W	G	E	Y	S	V	D	G	L	T	V	K	T	L	P	G	V	F	S	R	D	G	L	D	V	G	S	Q	L	.	.	.	L	L	S	T	L	T	P	H	T	K
Template Known Secondary structure							T	T	T	S									T	T										S						G	G	G	G							T	T							T	T		T	T	S	S	S								.	.	.					S		T	T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.	.																																																									.
Query SS confidence																							.	.																																																									.
Query Sequence		K	H	M	W	D	L	F	C	G	V	G	G	F	G	L	H	C	A	T	P	D	.	.	M	Q	L	T	G	I	E	I	A	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	R	L	Q	F	Q	A	L	D	S	T	Q	F	A	T	A	Q	G	D	V	P	E	L	V	L	V	N	P	P	R	R	.
Query Conservation																							.	.																																																									.
Alig confidence																							.	.																										.												.	.	.																	.
Template Conservation																																																		.												.	.	.
Template Sequence		G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	E	G	E	V	F	A	S	N	V	F	S	.	.	.	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D
Template Known Secondary structure		S	B			B	T	T		T	T	S											T	T		B						S	B														T	T		.								S	T	T	T	.	.	.	T			S													S
Template Predicted Secondary structure																																																		.												.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
								312	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	G	I	G	K	P	L	C	D	Y	L	S	T	M	.	A	P	R	F	I	I	Y	S	S	C	N
Query Conservation		.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.														.
Template Conservation
Template Sequence		G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N
Template Known Secondary structure		S	S															G	G	G
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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