Job Description P75817 Confidence 44.09% Date Thu Jan 5 12:14:29 GMT 2012 Rank 470 Aligned Residues 86 % Identity 16% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																		.																.	.	.	.	.														.
Query SS confidence																				.	.	.																		.																.	.	.	.	.														.
Query Sequence		F	G	L	H	C	A	T	P	D	M	Q	L	T	G	I	E	I	A	.	.	.	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	.	R	L	Q	F	Q	A	L	D	S	T	Q	F	A	T	A	.	.	.	.	.	Q	G	D	V	P	E	L	V	L	V	N	P	P	.	R	R	G	I	G	K	P
Query Conservation																				.	.	.																		.																.	.	.	.	.														.
Alig confidence																				.	.	.																		.																.	.	.	.	.														.
Template Conservation
Template Sequence		L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I	I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	I	I	V	D	T	S	G	R	H	K	Q	E	D	S
Template Known Secondary structure									T	T											S	S	S														T										S																T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		317	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		L	C	D	Y	L	S	T	M	.	.	.	.	A	P	R	F	I	I	Y	S
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	F	E	E	M	L	Q	V	A	N	A	I	Q	P	D	N	I	V	Y	V
Template Known Secondary structure																S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions