Job Description P75817 Confidence 57.75% Date Thu Jan 5 12:14:29 GMT 2012 Rank 415 Aligned Residues 86 % Identity 15% Template c2iy3A_ PDB info PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome Resolution 16.00 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																		.																.	.	.	.	.												.
Query SS confidence																				.	.	.																		.																.	.	.	.	.												.
Query Sequence		F	G	L	H	C	A	T	P	D	M	Q	L	T	G	I	E	I	A	.	.	.	S	E	A	I	A	C	A	K	Q	S	A	A	E	L	G	L	T	.	R	L	Q	F	Q	A	L	D	S	T	Q	F	A	T	A	.	.	.	.	.	Q	G	D	V	P	E	L	V	L	V	N	.	P	P	R	R	G	I	G	K	P
Query Conservation																				.	.	.																		.																.	.	.	.	.												.
Alig confidence																				.	.	.																		.																.	.	.	.	.												.
Template Conservation
Template Sequence		L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P
Template Known Secondary structure									T	T										S	S																T								T	T																		T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		L	C	D	Y	L	S	T	M	.	.	.	.	A	P	R	F	I	I	Y	S
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	M	G	E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V
Template Known Secondary structure																S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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