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Job Description | P75817 | Confidence | 57.56% | Date | Thu Jan 5 12:14:29 GMT 2012 |
Rank | 416 | Aligned Residues | 99 |
% Identity | 14% | Template | c2f00A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; |
PDBTitle: escherichia coli murc
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Resolution | 2.50 Å |
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218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | S | Q | L | Y | A | T | A | R | D | W | V | R | Q | L | P | V | K | H | M | W | D | L | . |
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F | C | G | V | G | G | F | G | L | H | C | A | T | P | D | M | Q | L | T | G | I | E | I | A | S | E | A | I | A | C | A | K | Q | S | A | A | E | L | G | L | T | R | L | Q | F | Q | A | L | D | S | T | Q | F | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | Q | Q | L | A | K | L | R | S | I | V | P | E | X | R | R | V | R | H | I | H | F | V | G | I | G | G | A | G | X | G | G | I | A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | X | N | . |
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L | G | A | T | I | Y | F | N | H | R | P | E | N | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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. | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
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295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | A | Q | G | D | V | P | E | L | V | L | V | N | P | P | R | R | G | I | G | K | P | L | C | D | Y | L | S | T | M | A | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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R | D | A | S | V | V | V | V | S | S | A | I | S | A | D | N | P | E | I | V | A | A | H | E | A | R | I | P |
Template Known Secondary structure |   |
. | . | . | . | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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