Job Description P37673 Confidence 3.18% Date Thu Jan 5 11:56:46 GMT 2012 Rank 93 Aligned Residues 82 % Identity 10% Template c3jzvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	I	D	G	K	N	I	Y	T	Q	I	I	D	L	T	T	R	E	A	V	V	N	R	P	E	V	H	R	R	Y	I	D	I	Q	F	L	A	W	G	E	E	K	I	G	I	A	I	D	T	G	N	N	K	V	S	E	S	L	L	E	Q	R	N	I	I	F	Y	H	D	S	E	H	E	S	F	I	E	M
Query Conservation
Alig confidence																																.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	L	F	S	G	N	G	L	T	G	E	L	R	Y	F	E	V	G	P	G	G	H	S	T	L	E	R	H	Q	.	H	A	H	G	V	X	I	L	K	G	R	G	H	A	X	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	A	V
Template Known Secondary structure								T	T		S																	B	B		S	.	S																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																											.	90	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	S	Y	A	I	F	F	P	Q	D	V	H	R	P	G	C	I	M	Q	T	A	S	E	I	R	K	I	V	V
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		A	P	Y	D	L	V	T	I	P	G	W	S	W	H	Q	F	R	.	.	A	P	A	D	E	A	L	G	F	L	C	X
Template Known Secondary structure			T	T							T	T							.	.			T	T	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions