Job Description P37673 Confidence 6.07% Date Thu Jan 5 11:56:46 GMT 2012 Rank 54 Aligned Residues 61 % Identity 15% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	I	I	D	L	T	T	R	E	A	V	V	N	R	P	E	V	H	R	R	Y	I	D	I	Q	F	L	A	W	G	E	E	K	I	G	I	A	I	D	T	G	N	N	K	V	S	E	S	L	L	E	Q	R	N	I	I	F	Y	H	D	S	E	H	E	S	F	I	E	M	I	P	G	S	Y	A	I	F	F	P
Query Conservation
Alig confidence																					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	X	A	V	K	I	W	F	D	K	G	A	E	G	Y	V	H	A	H	.	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	V	L	T	A	G	D	S	F	F	V	P	P
Template Known Secondary structure											T	T									.	S	S																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T							T
Template Predicted Secondary structure																					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																											.	.	.	.	.	.	.	.	80	.	.	.	.	.
		127	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	V	H	R	P	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	D	H	G	A	V	C
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions