 |
Job Description | P37673 | Confidence | 3.81% | Date | Thu Jan 5 11:56:46 GMT 2012 |
Rank | 78 | Aligned Residues | 32 |
% Identity | 13% | Template | c2opwA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:phyhd1 protein; |
PDBTitle: crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo)
|
Resolution | 1.90 Å |
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | M | I | P | G | S | Y | A | I | F | F | P | Q | D | V | H | R | P | G | C | I | M | Q | T | A | S | E | I | R | K | I | V | V |
Query Conservation |   |
|   |
|   |   |
|   |
|   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|   | . | . |   |
|   |
|   |   |   |
|   |
|   |   |
Template Sequence |   |
T | P | V | Q | R | G | A | L | V | L | I | H | G | E | V | V | H | K | S | K | . |
. |
Q | N | L | S | D | R | S | R | Q | A | Y | T |
Template Known Secondary structure |   |
 |
| B |
| T | T |
|  |  |  |  |  | T | T |
|  |  |  |  |
| . | . |
| B |
| S | S | S |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
|
250 | . | . | . | . | . | . | . | . | . | 260 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|