Job Description P37673 Confidence 6.12% Date Thu Jan 5 11:56:46 GMT 2012 Rank 53 Aligned Residues 67 % Identity 10% Template c2ca9B_ PDB info PDB header:transcriptional regulation Chain: B: PDB Molecule:putative nickel-responsive regulator; PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation Resolution 2.05 Å

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		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.											.
Query SS confidence												.											.
Query Sequence		F	G	H	I	A	Q	P	N	P	C	.	R	L	P	A	A	I	E	K	A	L	.	D	F	L	R	A	T	D	F	N	A	L	E	P	G	V	V	E	I	D	G	K	N	I	Y	T	Q	I	I	D	L	T	T	R	E	A	V	V	N	R	P	E	V	H	R	R	Y	I	D	I
Query Conservation												.											.
Alig confidence												.											.																			.	.
Template Conservation																																										.	.
Template Sequence		L	D	N	R	I	I	K	N	G	Y	S	S	R	S	E	L	V	R	D	M	I	R	E	K	L	V	E	D	N	W	A	E	D	N	P	N	D	E	S	K	.	.	I	A	V	L	V	V	I	Y	D	H	H	Q	R	E	L	N	Q	R	M	I	D	I	Q	H	A	S	G	T	H
Template Known Secondary structure				T	T	T	G	G	G	T		S	S																							T	T					.	.										T	T	S	T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions