Job Description Q46866 Confidence 26.76% Date Thu Jan 5 12:35:25 GMT 2012 Rank 12 Aligned Residues 63 % Identity 21% Template d2df7a1 SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Birnaviridae-like VP Resolution 2.60

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		L	S	P	V	N	Q	S	Q	T	F	G	V	A	W	D	D	P	A	T	T	A	P	E	A	F	R	F	D	I	C	G	S	V	S	E	P	I	P	.	.	.	.	.	.	.	.	.	D	N	R	Y	G	V	S	N	G	E	L	T	G	G	R	Y	A	V	.	.	.	.	.	.	A	R	H	V	G	E	L	D	D
Query Conservation																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence																.	.	.																						.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		F	F	P	G	F	P	G	S	I	V	G	A	H	Y	.	.	.	T	L	Q	S	N	G	N	Y	K	F	D	Q	M	L	L	T	A	Q	N	L	P	A	S	Y	N	Y	C	R	L	V	S	R	S	L	T	V	R	S	S	T	L	P	G	G	V	Y	A	L	N	G	T	I	N	A	V	T	F	Q	G	S	L	S	E
Template Known Secondary structure				T	T		S	S	S							.	.	.				T	T	S											S	S		G	G	G	T																				T	T			S											S	S		G	G	G
Template Predicted Secondary structure																.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		111
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		136

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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