Job Description Q46866 Confidence 99.95% Date Thu Jan 5 12:35:25 GMT 2012 Rank 6 Aligned Residues 153 % Identity 14% Template c3b49A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2189 protein; PDBTitle: crystal structure of an uncharacterized conserved protein from2 listeria innocua Resolution 1.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																							.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	N	I	I	D	F	P	S	I	P	V	A	M	L	P	H	R	C	S	P	.	.	E	L	L	N	Y	S	V	A	K	F	I	M	W	R	K	E	T	G	L	S	P	V	N	Q	S	Q	.	.	.	.	.	.	.	.	.	.	.	T	F	G	V	A	W	D	D	P	A	T	T	A	P	E	A	F	R	F	D
Query Conservation																							.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	E	R	I	F	V	P	E	X	N	F	L	X	V	D	G	K	G	D	P	D	G	E	E	Y	Q	K	A	V	Q	S	L	Y	A	I	A	Y	T	I	K	X	S	K	X	G	E	T	R	L	D	G	Y	S	D	F	V	V	P	P	L	E	G	F	W	W	S	E	G	K	F	D	L	K	D	R	D	A	W	L
Template Known Secondary structure		S																		S		T	T	S																				G	G	G	S			T	T	T	T	S			B												S	S	S			T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		74	.	.	.	.	.	80	.	.																				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query Sequence		I	C	G	S	V	S	E	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	N	R	Y	G	V	S	N	G	E	L	T	G	G	R	Y	A	V	A	R	H	V	G	E	L	D	D	I	S	H	T	V	W	G	I	I	R	H	W	L	P	A	S	G	E	K	M	.	.	.	R
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.											.	.	.
Template Conservation																																																																			.
Template Sequence		W	T	S	I	L	R	Q	P	D	F	V	T	E	E	V	L	E	W	A	K	E	V	A	R	K	K	K	P	D	V	D	T	S	R	V	K	L	V	R	F	E	E	G	E	C	V	Q	X	X	H	V	G	P	F	S	E	E	V	H	T	V	A	E	X	H	.	Q	F	X	E	T	E	G	L	R	N	D	T	G	A
Template Known Secondary structure										T	T																		T	T	S			T	T																		S		G	G	G										.							T			B		B	T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	P	I	L	F	H	Y	T	N	L	A	E	G	V	T	E	Q	R	L	E	T	D	V	Y	V	P	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	K	H	H	E	I	Y	L	S	D	P	R	K	A	N	P	E	K	X	K	T	I	L	R	L	P	V	S
Template Known Secondary structure		T	B								S		T	T	T	S		G	G	G									B
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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