 |
Job Description | P0A6E6 | Confidence | 5.28% | Date | Thu Jan 5 11:02:57 GMT 2012 |
Rank | 40 | Aligned Residues | 68 |
% Identity | 10% | Template | d1sefa_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| YlbA-like
|
Resolution | 2.05 |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | S | A | E | Q | Q | M | . |
. |
. |
. |
. |
. |
F | S | G | L | V | E | K | I | Q | V | T | G | S | E | G | E | L | G | I | Y | P | G | H | A | P | L | L | T | A | I | K | P | G | . |
. |
. |
M | I | R | I | V | K | Q | H | G | H | E | E | F | I | Y | L | S | G | G | I | L | E | V | Q | P | G | N | V | T | V |
Query Conservation |   |
|
|
|
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|
|   |
|   |
|
| . | . | . |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
| . | . | . | . | . |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
I | I | P | H | D | G | L | V | Q | N | A | V | P | G | F | E | N | V | D | I | S | I | L | G | S | P | K | L | G | . |
. |
. |
. |
. |
A | T | F | V | D | Y | I | A | T | F | H | K | N | G | Q | Q | T | T | G | F | G | G | D | G | I | Q | T | L | V | Y | V | I | D | G | R | L | R | V | S | D | G | Q | E | T | H | E |
Template Known Secondary structure |   |
 |  |
| G | G | G |
|
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |
| S |
| G | G | G | T | . | . | . | . | . |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
| S | S | B | T | T |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
80 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
L | A |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
|   |
Template Sequence |   |
L | E |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |
|
Template SS confidence |   |
|
|
  |   |
106 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|