Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E6
Confidence100.00%DateThu Jan 5 11:02:57 GMT 2012
Rank1Aligned Residues133
% Identity29%Templatec2rq7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: solution structure of the epsilon subunit chimera combining2 the n-terminal beta-sandwich domain from t. elongatus bp-13 f1 and the c-terminal alpha-helical domain from spinach4 chloroplast f1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLAD
Query Conservation      
 



        
  
   
  
  



 
 
 

 
 

 
 
           
 

   
    
 

  
Alig confidence 


















































.



























Template Conservation 
 
 
 



        
  
      
  



 
 
 

 
 

 
 
.          
 

   
    
 

  
Template Sequence  MVMTVRVIAPDKTVWDAPAEEVILPSTTGQLGILSNHAPLLTALETGVMRV. RQDREWVAIALMGGFAEVENNEVTILVN
Template Known Secondary structure 


SSSS

TTS
SSS
S
S.
SSS
S
SS
S
Template Predicted Secondary structure 
















.




Template SS confidence 















































































   1........10.........20.........30.........40.........50. ........60.........70.........
 
   83......90.........100.........110.........120.........130......
Predicted Secondary structure 





Query SS confidence 





















































Query Sequence  TAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTK
Query Conservation   
    


   
      
   
               
 

  

       
Alig confidence 





















































Template Conservation   
    


   
      

  
           
   
 

 


  
    
Template Sequence  GAERGDTIDPQEAQQTLEIAEANLRKAEGARQKIEANLALRRARTRVEASNTIS
Template Known Secondary structure  SGGG

TS

SS

Template Predicted Secondary structure 








Template SS confidence 





















































   80.........90.........100.........110.........120.........130...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions