Return to main results Retrieve Phyre Job Id

Job DescriptionP33343
Confidence99.91%DateThu Jan 5 11:51:44 GMT 2012
Rank8Aligned Residues149
% Identity13%Templatec3jwnF_
PDB info PDB header:protein binding/cell adhesionChain: F: PDB Molecule:protein fimf; PDBTitle: complex of fimc, fimf, fimg and fimh
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  DTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITG
Query Conservation    
 
 
 
 
   

 
        
 
  
        
                                       
Alig confidence 






















































.....



















Template Conservation 




   
 
   

 
        
 

 
                
 
    .....
        
 
 
      
Template Sequence  ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSP. . . . . CGNAVSAVKVGFTGVADSHN
Template Known Secondary structure 

S












TGGGS








STT

STT
B


.....
TT

S
TT
Template Predicted Secondary structure 




















.....












Template SS confidence 















































































   1........10.........20.........30.........40.........50..... ....60.........70.....
 
   106.. .110.........120.........130.........140 .........150.........160.........170.........180
Predicted Secondary structure 


....



















.














Query SS confidence 


. . . .































.







































Query Sequence  NDK. . . . AIASSNDTVGYYLYLGDNSDVLDVSAPFNIES. YKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
Query Conservation     ....     
  


 
                   .         
   
         

 
   
  

 
 

Alig confidence 


....































.



















.


















Template Conservation              
 



 
                                 
      .  
  
   
     
 

Template Sequence  ANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQ. VPVTAGHINATATFTLEYQ
Template Known Secondary structure 


SSSB
BSTTS
B

TT

TTTS



TTS
SS.SS
B

B





Template Predicted Secondary structure 





























.




Template SS confidence 















































































   76...80.........90.........100.........110.........120.........130..... ....140.........150....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions