Job Description Q46855 Confidence 98.58% Date Thu Jan 5 12:35:15 GMT 2012 Rank 15 Aligned Residues 150 % Identity 7% Template d2arca_ SCOP info Double-stranded beta-helix Regulatory protein AraC Regulatory protein AraC Resolution 1.50

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		L	K	N	K	E	N	S	L	S	G	L	L	P	D	V	R	L	L	Y	G	E	.	.	.	.	T	P	F	A	R	T	P	V	M	Y	E	P	G	I	I	I	L	F	S	G	H	K	I	G	Y	I	N	E	R	V	F	R	Y	D	A	N	E	Y	L	L	L	T	V	P	L	P	F	E	C	E	T	Y	A	T	S
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																																																					.
Template Conservation																																																																															.
Template Sequence		L	L	P	G	Y	S	F	N	A	H	L	V	A	G	L	T	P	I	E	A	N	G	Y	L	D	F	F	I	D	R	P	L	G	M	K	G	Y	I	L	N	L	T	I	R	G	Q	G	V	V	K	N	Q	G	R	E	F	V	C	R	P	G	D	I	L	L	F	P	P	G	E	I	H	H	Y	G	R	H	.	P	E
Template Known Secondary structure		T	S	T	T				S	S	S										T	T	S	T	T		S					T	T			S	S																T	T							T	T							T	T									.	T	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		E	V	P	L	A	G	L	R	L	N	V	D	I	L	Q	L	Q	E	L	L	M	D	I	G	E	D	E	H	F	Q	P	S	M	A	A	S	G	I	N	S	A	T	L	S	E	E	I	L	C	A	A	E	R	L	L	D	V	M	E	R	P	L	D	.	A	R	I	L	G	K	Q	I	I	R	E	I	L	Y	Y	V
Query Conservation																																																																	.
Alig confidence																																						.	.	.	.																								.
Template Conservation																																						.	.	.	.
Template Sequence		A	R	E	W	Y	H	Q	W	V	Y	F	R	P	R	A	Y	W	H	E	W	L	N	W	P	S	I	F	A	N	T	G	F	F	R	P	D	.	.	.	.	E	A	H	Q	P	H	F	S	D	L	F	G	Q	I	I	N	A	G	Q	G	E	G	R	Y	S	E	L	L	A	I	N	L	L	E	Q	L	L	L	R	R
Template Known Secondary structure		S	S													G	G	G	G	G	G								T	T								.	.	.	.	T	T	T																			S	S	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions