 |
Job Description | Q46855 | Confidence | 92.67% | Date | Thu Jan 5 12:35:15 GMT 2012 |
Rank | 127 | Aligned Residues | 70 |
% Identity | 16% | Template | d1uika2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.30 |
|
 |
  |   |
49 | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
|
. | . | . | |
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|  |  |
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | R | L | L | Y | G | E | . |
T | P | F | A | R | T | P | V | M | Y | E | P | . |
. |
. |
G | I | I | I | L | F | S | G | H | K | I | G | Y | I | N | E | . |
. |
. |
. |
. |
R | V | F | . |
. |
R | Y | D | A | N | E | Y | L | L | L | T | V | P | L | P | F | E | C | E | T | Y | A | T | S | E | V | P | L | A | G |
Query Conservation |   |
  |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   | . | . |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |
|   |
Template Sequence |   |
D | V | F | L | S | V | V | D | M | N | E | G | A | L | F | L | P | H | F | N | S | K | A | I | V | V | L | V | I | N | E | G | E | A | N | I | E | L | V | G | I | P | L | E | V | R | K | Y | R | A | E | L | S | E | Q | D | I | F | V | I | P | A | G | Y | P | V | V | V | N | A | . |
. |
T | S | D | L | N | F | F | A |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  | . | . | S | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
391 | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | |
|
. | . | . | . | . | . | . | . |
  |
  |   |
118 | . | 120 |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
L | R | L |
Query Conservation |   |
  |   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
F | G | I |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
481 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|