Job Description Q46855 Confidence 89.09% Date Thu Jan 5 12:35:15 GMT 2012 Rank 231 Aligned Residues 74 % Identity 11% Template c3ehkC_ PDB info PDB header:plant protein Chain: C: PDB Molecule:prunin; PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis Resolution 3.20 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.													.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	P	D	V	R	L	L	Y	G	E	T	P	F	A	R	T	P	V	M	Y	E	P	G	I	I	I	L	F	S	G	H	K	I	G	Y	I	.	.	.	.	N	E	R	V	F	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	D	A	N	E	Y	L	L	L	T	V	P	L	P	F	E	C	E	T	Y	A
Query Conservation																																							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																																																.	.
Template Sequence		G	V	A	A	S	R	I	T	I	Q	R	N	G	L	H	L	P	S	Y	S	N	A	P	Q	L	I	Y	I	V	Q	G	R	G	V	L	G	A	V	F	S	G	C	P	E	T	F	E	E	S	Q	L	D	R	H	Q	K	T	R	R	I	R	E	G	D	V	V	A	I	P	A	G	V	A	Y	W	S	Y	N	.	.
Template Known Secondary structure		T										T	T									S	S																		T	T														S							T	T							T	T								.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	E	V	P	L	A	G	L	R	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	D	Q	E	L	V	A	V	N	L	F
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions