Job Description Q46855 Confidence 96.44% Date Thu Jan 5 12:35:15 GMT 2012 Rank 65 Aligned Residues 76 % Identity 7% Template c2fqpD_ PDB info PDB header:metal binding protein Chain: D: PDB Molecule:hypothetical protein bp2299; PDBTitle: crystal structure of a cupin domain (bp2299) from bordetella pertussis2 tohama i at 1.80 a resolution Resolution 1.80 Å

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		48	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure											.													.	.	.															.	.
Query SS confidence											.													.	.	.															.	.
Query Sequence		P	D	V	R	L	L	Y	G	E	.	T	P	F	A	R	T	P	V	M	Y	E	P	.	.	.	G	I	I	I	L	F	S	G	H	K	I	G	Y	I	.	.	N	E	R	V	F	R	Y	D	A	N	E	Y	L	L	L	T	V	P	L	P	F	E	C	E	T	Y	A	T	S	E	V	P	L	A	G	L	R	L	N
Query Conservation											.													.	.	.															.	.
Alig confidence											.													.	.	.															.	.																										.	.
Template Conservation																																																																				.	.
Template Sequence		E	R	V	K	V	T	E	W	R	F	P	P	G	G	E	T	G	W	H	R	H	S	X	D	Y	V	V	V	P	X	T	T	G	P	L	L	L	E	T	P	E	G	S	V	T	S	Q	L	T	R	G	V	S	Y	T	R	P	E	G	V	E	H	N	V	I	N	.	.	P	S	D	T	E	F	V	F	V	E	I	E
Template Known Secondary structure		S	S										T	T		B			S					S							S	S									T	T									T	T							T	T								.	.		S	S	S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.
		122	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	A	A
Template Known Secondary structure					.
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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