Job Description Q46855 Confidence 91.64% Date Thu Jan 5 12:35:15 GMT 2012 Rank 160 Aligned Residues 85 % Identity 12% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		R	V	L	K	R	I	E	N	K	Y	T	E	N	L	S	V	E	Q	L	A	A	E	A	N	M	S	V	S	A	F	H	H	N	F	K	S	V	T	.	.	.	.	.	.	.	.	S	T	S	P	L	Q	Y	L	K	N	Y	R	L	H	K	A	R	M	M	I	I	H	D	G	M	K	A	S	A	A	A	M	R	V
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.				.	.
Template Conservation																																																			.	.
Template Sequence		T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	.	.	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L
Template Known Secondary structure													T	T											T												S	G	G	G	T	T									.	.		S	S																										T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		286	.	.		.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	Y	E	.	S	A	S	Q	F	S	R	E	F	K	R	Y
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure		T			S												T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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