Job Description Q46855 Confidence 93.72% Date Thu Jan 5 12:35:15 GMT 2012 Rank 103 Aligned Residues 80 % Identity 6% Template c1jumB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hypothetical transcriptional regulator in qaca PDBTitle: crystal structure of the multidrug binding transcriptional2 repressor qacr bound to the natural drug berberine Resolution 2.98 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		Q	T	H	F	S	L	I	S	R	V	L	K	R	I	E	N	K	Y	T	E	N	L	S	V	E	Q	L	A	A	E	A	N	M	S	V	S	A	F	H	H	N	F	.	.	K	S	V	T	S	T	S	P	L	Q	Y	L	K	N	Y	R	L	H	K	A	R	M	M	I	I	H	D	G	M	K	A	S	A	A	A	M
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		N	L	K	D	K	I	L	G	V	A	K	E	L	F	I	K	N	G	Y	N	A	T	T	T	G	E	I	V	K	L	S	E	S	S	K	G	N	L	Y	Y	H	F	K	T	K	E	N	L	F	L	E	I	L	N	I	E	E	S	K	W	Q	E	Q	W	K	K	E	Q	I	K	A	K	T	N	R	E	K	F	Y	L
Template Known Secondary structure																		T		T	T	T	S									T	T										S		S																								T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		284	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions