Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEG1
Confidence99.89%DateThu Jan 5 11:23:13 GMT 2012
Rank3Aligned Residues236
% Identity11%Templatec2onkC_
PDB info PDB header:membrane proteinChain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  YFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLV
Query Conservation 
        
    
       
                                   
   
             

  
Alig confidence 











































........................











Template Conservation   
    
  
           
       
              ........................        

  
Template Sequence  RLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDP. . . . . . . . . . . . . . . . . . . . . . . . AVWKVVLTTYYA
Template Known Secondary structure  TTTTT
........................
Template Predicted Secondary structure 



........................
Template SS confidence 















































































   2.......10.........20.........30.........40..... ....50.......
 
   105....110.........120.........130.........140.........150...... ...160.........170.
Predicted Secondary structure 


.............





Query SS confidence 



















































. . . . . . . . . . . . .














Query Sequence  GCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAI. . . . . . . . . . . . . FGPSIGNAALALTFV
Query Conservation                                         

   
       .............         
     
Alig confidence 



















































.............














Template Conservation 
         
    
                
      

                                 

    
Template Sequence  ALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLF
Template Known Secondary structure  S


SSS
STTSTTTTT
SS

TTS
Template Predicted Secondary structure 




















Template SS confidence 















































































   58.60.........70.........80.........90.........100.........110.........120.........130.......
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  ALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEW
Query Conservation                        


   
 
   
   



   
 
     
 
             
         
Alig confidence 






































































....




Template Conservation     
         
  
     


   


       
 

   
 
     
 
            
  ....     
Template Sequence  VSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAY. . . . YPMIA
Template Known Secondary structure  S
TT

T

TT

....SS

Template Predicted Secondary structure 






....


Template SS confidence 















































































   138.140.........150.........160.........170.........180.........190.........200........ .210...
 
   252.......260.........270.........280.........290
Predicted Secondary structure 
Query SS confidence 






































Query Sequence  GTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGL
Query Conservation 
  
                        

   

   
Alig confidence 













..






















Template Conservation                ..       
   
          
Template Sequence  PTLIYERYLSEGLS. . AAMPVAAILILLSLAVFVALRII
Template Known Secondary structure 
GG..GTT
Template Predicted Secondary structure 

..
Template SS confidence 






































   214.....220....... ..230.........240.........250
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions