Job Description P0A6L4 Confidence 96.08% Date Thu Jan 5 11:03:26 GMT 2012 Rank 78 Aligned Residues 243 % Identity 15% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	A	L	L	T	P	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	.	.	.	.	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V	S	T
Query Conservation																																																				.	.	.	.
Alig confidence																																	.																			.	.	.	.
Template Conservation																																	.
Template Sequence		P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	.	F	T	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	G	T	C
Template Known Secondary structure									S	S	S	S																	T	T		S	.	B				T	T		S	S	B	T	T	B																					S	S			B								S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																					.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	Y	Y	P	F	S	F	E	E	H	C	D	.	.	.	.	.	.	.	.	.	.	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																												.
Template Sequence		E	D	M	M	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	M	H	F	R	V	L	A	K	A	L	R	L	S	.	G	G	D	H	I
Template Known Secondary structure															T		S																									T								T	T						S		S	S	S	S														.			S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	V	G	A	L	K	Q	T	S	G	D	L	Y	Q	M	E	Q	I	R	R	E	.	H	P	D	L	V	L	Y	N	G	Y	D
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation								.
Template Sequence		H	S	G	T	V	V	.	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	Y	T	E	K	D	R	S	R	G	I	Y	F	T	Q	S	W	V	S	T	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	T	E	I	F	G	D	D	S	V	L	Q	F	G	G	G
Template Known Secondary structure						S	S	.	S	S	S																	S					B	G	G	G	T	B		S					T	T										S	S			G	G	G										S	S	S					S
Template Predicted Secondary structure								.
Template SS confidence
		327	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	D	I	Q	T	A	Q	K	L	Q	T	E	C	N	K	V	I	D	L	L	I	K	T	G	V	F	R	G	L	K	T	V	L	H	Y	M	D	V	V	S	V	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.													.	.	.	.																																.	.	.
Template Conservation		.	.	.	.	.	.	.													.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	T	L	G	H	P	W	G	N	A	P	G	A	.	.	.	.	V	A	N	R	V	A	L	E	A	C	V	Q	A	R	N	E	G	R	D	L	A	R	E	G	N	T	I	I	R	E	A	.	.	.	T	K	W	S	P	E	L	A	A	A	C	E	V	W	K	E	I	K	F	E	F
Template Known Secondary structure		.	.	.	.	.	.	.			T	S	T	T							.	.	.	.																T	T															.	.	.	T	T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.	.																																.	.	.
Template SS confidence
									406	.	.	.	410	.	.	.	.	.	.	.					.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.				.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions