Job Description P0A6L4 Confidence 93.64% Date Thu Jan 5 11:03:26 GMT 2012 Rank 130 Aligned Residues 232 % Identity 17% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		A	A	L	L	T	P	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	.	.	.	G	K	I	K	L	I	A	H	V	G	C	V	S	T	A
Query Conservation																																																																.	.	.
Alig confidence																																																																.	.	.
Template Conservation
Template Sequence		P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V	N
Template Known Secondary structure									S	S	S	S																	T	T		S						T	T		S		B	T	T	B																					S	S							B			S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	.	.	.	.	.	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	L	P	G	V
Query Conservation																																																									.	.	.	.	.
Alig confidence																									.	.	.	.																		.											.	.	.	.	.
Template Conservation																									.	.	.	.																		.
Template Sequence		I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	.	.	.	.	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	.	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V
Template Known Secondary structure														T											.	.	.	.																	T	.								T	T	T					S		T	T	S	S														T
Template Predicted Secondary structure																									.	.	.	.																		.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		162	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.
Predicted Secondary structure									.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.	.
Query Sequence		G	A	L	K	Q	T	S	.	.	.	.	.	.	G	D	L	Y	Q	M	E	Q	I	R	R	.	.	.	.	.	.	.	.	E	H	P	D	L	V	L	Y	N	G	.	.	Y	D	E	I	F	A	S	G	L	L	.	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	.	.	.	.	.	.	.	.	.	G	W
Query Conservation									.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	I	H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A	G	A	K
Template Known Secondary structure		S									S	S	S																S			T	T										S	S			G	G	G										S												T		T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		R	Y	Q	G	I	V	K	A	L	K	E	G	.	D	I	Q	T	A	Q	K	L	Q	T	E	C	N	K	V	I	D	L	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		A	L	R	D	A	I	D	A	A	I	E	G	V	D	L	D	E	K	A	K	S	S	P	E	L	K	K	S	L	R	E	V
Template Known Secondary structure													T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions